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Assuming that the automatic customization at the global level was done when AUCTeX was installed, your choice is now: will you use it? If you use it, you will benefit by having access to all the symbols and environments available for completion purposes. The drawback is slower load time when you edit a new file and perhaps too many confusing symbols when you try to do a completion.
You can disable the automatic generated global style hooks by setting
TeX-auto-global to nil.
Directories containing the site’s TeX style files.
Directory containing hand generated TeX information. Must end with a slash.
These correspond to TeX macros shared by all users of a site.
Directory containing automatically generated information.
For storing automatic extracted information about the TeX macros shared by all users of a site.
This document was generated by Ralf Angeli on January 13, 2013 using texi2html 1.82.