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To control whether a capture template should be accessible from a specific context, you can customize org-capture-templates-contexts. Let's say for example that you have a capture template "p" for storing Gnus emails containing patches. Then you would configure this option like this:

     (setq org-capture-templates-contexts
           '(("p" (in-mode . "message-mode"))))

You can also tell that the command key "p" should refer to another template. In that case, add this command key like this:

     (setq org-capture-templates-contexts
           '(("p" "q" (in-mode . "message-mode"))))

See the docstring of the variable for more information.